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Intron Name: Anas_platyrhynchos_platyrhynchos_15_605241_606572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

605241 - 606572

Intron Length:

1332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CACCTTTCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TATGTCTCACCT

Flanking Amino Acid:

IQSNKMDMSGGILQDKRMEM

Intron Amino Acid Position:

1177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

69.7

0.44

0.8

30.2

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

50.4

0.09

1.9

72.77

44.1

Associated Gene:

Gene:

TNRC6A

Ensembl Gene ID:

ENSAPLG00000009978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029030

594145 - 629519

35375

ENSAPLT00000010410

594145 - 629519

35375