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Intron Name: Anas_platyrhynchos_platyrhynchos_15_608553_609337_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

608553 - 609337

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

ATGTCAGTAACT

Flanking Amino Acid:

MSSKESSSGSGWGEPSTPAT

Intron Amino Acid Position:

1019

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

77.2

37.6

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

56.8

0.15

1.2

59.6

39.7

Minor 5ss

-1.3

3.3

54.4

43.7

Minor BPS

55.6

0.25

2.3

79.61

42.2

Associated Gene:

Gene:

TNRC6A

Ensembl Gene ID:

ENSAPLG00000009978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029030

594145 - 629519

35375

ENSAPLT00000010410

594145 - 629519

35375