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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6106468_6113888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6106468 - 6113888

Intron Length:

7421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGAAGTTTAATA

Flanking Amino Acid:

LQRLLEIDSVGYDDVSETNL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.3

33.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

90.5

0.91

0.6

88.7

20.5

Minor 5ss

38.9

-1.2

2.9

48.7

47.5

Minor BPS

51.8

0.05

1.8

61.48

38.9

Associated Gene:

Gene:

PDGFA

Ensembl Gene ID:

ENSAPLG00000007507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031598

6105138 - 6137037

31900

ENSAPLT00000044792

6105138 - 6137514

32377

ENSAPLT00000023515

6105138 - 6122819

17682

ENSAPLT00000038855

6105138 - 6124320

19183

ENSAPLT00000007807

6105138 - 6126358

21221

ENSAPLT00000036964

6105138 - 6126444

21307

ENSAPLT00000031690

6105138 - 6126217

21080

ENSAPLT00000045147

6105138 - 6125793

20656