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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6116362_6123447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6116362 - 6123447

Intron Length:

7086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TCGTATTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCGTATTTTATA

Flanking Amino Acid:

PSRIHHRSVKVAKVEYIRKK

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

84.4

0.85

34.5

Major PPT

77.7

0.62

0.9

72.4

37.5

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

48.8

-0.1

1.8

59.18

41.1

Associated Gene:

Gene:

PDGFA

Ensembl Gene ID:

ENSAPLG00000007507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031690

6105138 - 6126217

21080

ENSAPLT00000045147

6105138 - 6125793

20656

ENSAPLT00000031598

6105138 - 6137037

31900

ENSAPLT00000044792

6105138 - 6137514

32377

ENSAPLT00000007807

6105138 - 6126358

21221

ENSAPLT00000038855

6105138 - 6124320

19183

ENSAPLT00000036964

6105138 - 6126444

21307