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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6123575_6125114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6123575 - 6125114

Intron Length:

1540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTATGTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTTATGTTAACA

Flanking Amino Acid:

TNSDYREEETGRPRESGKKR

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

82.3

31.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

74.2

0.54

69.1

40.6

Minor 5ss

58.3

0.28

2.3

72.3

Minor BPS

56.7

0.21

2.1

71.25

41.2

Associated Gene:

Gene:

PDGFA

Ensembl Gene ID:

ENSAPLG00000007507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007807

6105138 - 6126358

21221

ENSAPLT00000045147

6105138 - 6125793

20656