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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6123575_6126433_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6123575 - 6126433

Intron Length:

2859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTATTGTATCT

Flanking Amino Acid:

TNSDYREEETDVR*

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

82.3

31.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.1

0.81

0.7

81.1

Minor 5ss

58.3

0.28

2.3

72.3

Minor BPS

45.9

-0.2

2.2

68.51

42.7

Associated Gene:

Gene:

PDGFA

Ensembl Gene ID:

ENSAPLG00000007507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036964

6105138 - 6126444

21307