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Intron Name: Anas_platyrhynchos_platyrhynchos_15_615650_619560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

615650 - 619560

Intron Length:

3911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

ACTCCTGTAATT

Flanking Amino Acid:

EVPNSSKKQPGMPPIRDLVS

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

52.5

0.16

71.15

40.6

Associated Gene:

Gene:

TNRC6A

Ensembl Gene ID:

ENSAPLG00000009978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010410

594145 - 629519

35375