Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_61619_64748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61619 - 64748

Intron Length:

3130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTCC

5'SS Class:

major

3'SS Sequence:

TTCAAACCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTCTTTTCAAAC

Flanking Amino Acid:

SISFFLLFQYTMCCENLTCF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

69.9

35.6

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

70.9

0.47

0.9

62.4

38.5

Minor 5ss

43.7

-0.7

2.7

59.7

38.5

Minor BPS

56.1

0.17

1.6

67.06

38.8

Associated Gene:

Gene:

IL21R

Ensembl Gene ID:

ENSAPLG00000015284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020960

51741 - 71316

19576

ENSAPLT00000015934

52058 - 67690

15633