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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6250873_6277877_F

Intron Information:

Intron Rank:

136850

Intron Class:

major

Intron Phase:

Intron Coordinates:

6250873 - 6277877

Intron Length:

27005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTGA

5'SS Class:

major

3'SS Sequence:

TATTTAATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TCCTATTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

68.8

38.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

81.3

0.71

0.9

75.2

38.3

Minor 5ss

-0.9

2.4

50.7

45.6

Minor BPS

65.6

0.57

1.5

76.08

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029065

6249909 - 6278206

28298