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Intron Name: Anas_platyrhynchos_platyrhynchos_15_626778_629459_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

626778 - 629459

Intron Length:

2682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAC

U12 Branch Point Sequence:

ATCTGCACAAAT

Flanking Amino Acid:

KKKKEAAQKKAIEQKIKVPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

76.7

34.9

Major BPS

61.7

0.29

63.7

32.3

Major PPT

83.6

0.76

0.8

77.1

37.1

Minor 5ss

45.7

-0.5

2.5

58.5

Minor BPS

43.9

-0.3

2.2

65.08

44.8

Associated Gene:

Gene:

TNRC6A

Ensembl Gene ID:

ENSAPLG00000009978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029030

594145 - 629519

35375

ENSAPLT00000010410

594145 - 629519

35375