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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6279543_6288237_F

Intron Information:

Intron Rank:

147053

Intron Class:

major

Intron Phase:

Intron Coordinates:

6279543 - 6288237

Intron Length:

8695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTATT

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATAGATTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.2

38.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

93.6

0.98

0.6

89.1

19.8

Minor 5ss

46.1

-0.4

2.9

68.9

41.7

Minor BPS

43.4

-0.4

2.1

61.66

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038359

6279344 - 6289092

9749