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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6291376_6296368_R

Intron Information:

Intron Rank:

130928

Intron Class:

major

Intron Phase:

Intron Coordinates:

6291376 - 6296368

Intron Length:

4993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCCAT

5'SS Class:

major

3'SS Sequence:

TATGTTTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TGATCTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.3

68.8

43.8

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

68.1

0.41

1.1

72.1

37.9

Minor 5ss

-1.7

3.1

47.7

47.8

Minor BPS

0.55

1.3

68.89

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017665

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035184

6286180 - 6300453

14274

ENSAPLT00000021786

6286180 - 6298157

11978