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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6326760_6330344_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6326760 - 6330344

Intron Length:

3585

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCAGAGGGA

5'SS Class:

major

3'SS Sequence:

TTAAAAGCGGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTAAAA

U12 Branch Point Sequence:

TCTGGGTTAAAA

Flanking Amino Acid:

MKREHKEQRSTKVEQCMQGA

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.7

0.3

1.2

57.7

36.4

Major BPS

55.4

0.13

1.2

65.3

38.6

Major PPT

47.2

-0.1

1.2

42.6

Minor 5ss

17.9

-3.7

4.2

27.4

42.2

Minor BPS

44.2

-0.4

2.5

59.76

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007778

6326482 - 6332319

5838