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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6361776_6362366_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6361776 - 6362366

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

AAATACTGATTT

Flanking Amino Acid:

SILVPLNQCCRIRKSTYLRL

Intron Amino Acid Position:

470

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

83.2

0.75

0.7

77.2

31.6

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

46.9

-0.1

1.8

62.96

40.6

Associated Gene:

Gene:

FAM20C

Ensembl Gene ID:

ENSAPLG00000007305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007589

6361523 - 6418103

56581