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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6374827_6406382_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6374827 - 6406382

Intron Length:

31556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCATTAAAA

Flanking Amino Acid:

NYGQALFKPMKQTREQETPP

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

67.7

0.55

1.7

78.09

38.1

Associated Gene:

Gene:

FAM20C

Ensembl Gene ID:

ENSAPLG00000007305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007589

6361523 - 6418103

56581