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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6406462_6415414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6406462 - 6415414

Intron Length:

8953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ACATTTTAAAGT

Flanking Amino Acid:

DLVSQKITSVAMKSGGTQLK

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

73.2

38.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

88.7

0.87

0.6

84.5

23.5

Minor 5ss

50.3

0.01

2.4

63.2

42.8

Minor BPS

47.4

-0.1

1.9

61.73

42.9

Associated Gene:

Gene:

FAM20C

Ensembl Gene ID:

ENSAPLG00000007305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007589

6361523 - 6418103

56581