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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6415588_6417389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6415588 - 6417389

Intron Length:

1802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGGTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTTTCCTTTTTT

Flanking Amino Acid:

FNPRAAEQPEWQNEDNEEFL

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.2

35.9

Major BPS

76.3

0.65

67.3

39.3

Major PPT

71.8

0.49

1.1

69.5

41.6

Minor 5ss

29.2

-2.4

2.8

32.4

36.1

Minor BPS

48.5

-0

3.6

87.87

37.8

Associated Gene:

Gene:

FAM20C

Ensembl Gene ID:

ENSAPLG00000007305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007589

6361523 - 6418103

56581