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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6452_6961_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6452 - 6961

Intron Length:

510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

GAGCTAATAACT

Flanking Amino Acid:

LVAGLPPFRAGNEYLIFQKI

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

75.5

40.6

Major BPS

70.1

0.5

70.3

31.9

Major PPT

91.7

0.94

0.6

87.8

22.3

Minor 5ss

37.5

-1.4

3.3

49.3

46.4

Minor BPS

46.2

-0.2

1.8

61.79

41.2

Associated Gene:

Gene:

PDPK1

Ensembl Gene ID:

ENSAPLG00000015673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048498

890 - 25429

24540

ENSAPLT00000016388

890 - 25912

25023