Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_64824_67590_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

64824 - 67590

Intron Length:

2767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTCC

5'SS Class:

major

3'SS Sequence:

TGCTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTGTGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

69.4

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

84.3

0.77

0.8

76.4

37.7

Minor 5ss

38.1

-1.3

3.2

51.4

45.3

Minor BPS

43.2

-0.4

3.5

77.64

39.7

Associated Gene:

Gene:

IL21R

Ensembl Gene ID:

ENSAPLG00000015284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015934

52058 - 67690

15633