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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6865349_6866430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6865349 - 6866430

Intron Length:

1082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTAAATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGCTTTTAAAT

Flanking Amino Acid:

LNPEMLQIAQDTGKLNVAYF

Intron Amino Acid Position:

3678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

74.1

37.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.58

67.7

41.8

Minor 5ss

59.1

0.31

2.3

74.3

Minor BPS

65.2

0.56

1.4

78.07

38.3

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605