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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6866635_6868766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6866635 - 6868766

Intron Length:

2132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCATATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTCTTTCAACT

Flanking Amino Acid:

QARGTQASHQVLRDILKEVQ

Intron Amino Acid Position:

3610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

65.7

40.1

Major BPS

100

1.24

0.5

100

Major PPT

79.8

0.67

0.8

33.5

Minor 5ss

34.7

-1.7

3.5

45.4

49.7

Minor BPS

61.6

0.44

1.5

76.97

39.8

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605