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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6868952_6871532_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6868952 - 6871532

Intron Length:

2581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGAAA

5'SS Class:

major

3'SS Sequence:

AAACCACTCCTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

CCTTCCTCAAAC

Flanking Amino Acid:

ETTKRHLFFTVPRVVAVSPQ

Intron Amino Acid Position:

3548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

67.9

38.7

Major BPS

73.1

0.58

73.8

32.3

Major PPT

55.3

0.12

0.9

44.6

36.7

Minor 5ss

30.6

-2.2

3.3

39.7

45.9

Minor BPS

60.8

0.32

1.7

67.84

43.5

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605