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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6872602_6878516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6872602 - 6878516

Intron Length:

5915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGGT

5'SS Class:

major

3'SS Sequence:

TATTTTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

ATGTATATATTT

Flanking Amino Acid:

FQKLKGQFTTDFDFSVPGSM

Intron Amino Acid Position:

3400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

69.7

40.9

Major BPS

81.6

0.78

0.8

24.9

Major PPT

86.8

0.83

0.7

85.8

28.4

Minor 5ss

-2.2

3.6

47.4

Minor BPS

45.2

-0.2

1.9

63.95

40.8

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605