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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6880887_6883456_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6880887 - 6883456

Intron Length:

2570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTACA

5'SS Class:

strong_major

3'SS Sequence:

CATCTCCAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

GCATCTCCAAAT

Flanking Amino Acid:

GKLLLNLISQVGRVYPQAVY

Intron Amino Acid Position:

3216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

80.7

33.8

Major BPS

71.4

0.53

67.3

39.3

Major PPT

60.3

0.23

0.9

55.8

33.7

Minor 5ss

34.6

-1.7

2.9

Minor BPS

45.1

-0.2

1.9

60.14

42.8

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605