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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6884701_6887455_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6884701 - 6887455

Intron Length:

2755

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTCACAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

CTTGTCACAATG

Flanking Amino Acid:

LKGMFLAQINKSEEANKAFS

Intron Amino Acid Position:

3093

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

0.38

59.8

40.4

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

44.8

-0.5

1.9

51.59

43.5

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605