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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6888996_6893946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6888996 - 6893946

Intron Length:

4951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TAATGTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

GTTAGCATAACT

Flanking Amino Acid:

VSHVHTPLLQAAQQIIELQE

Intron Amino Acid Position:

2906

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.7

89.7

22.4

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

78.6

0.64

69.6

45.4

Minor 5ss

-1.8

3.2

48.5

47.2

Minor BPS

54.8

0.23

2.1

78.9

42.6

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605