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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6900882_6901260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6900882 - 6901260

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTCT

5'SS Class:

strong_major

3'SS Sequence:

GAATTTTATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TGAATTTTATTC

Flanking Amino Acid:

AYEQHGFFEQAQETYEKAME

Intron Amino Acid Position:

2759

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

74.1

37.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

73.1

0.52

70.4

44.3

Minor 5ss

59.1

0.31

2.3

74.3

Minor BPS

48.7

-0.1

1.5

55.96

36.6

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605