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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6902929_6903599_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6902929 - 6903599

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTACT

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TTTTTCCCATGT

Flanking Amino Acid:

KFLDSLREVKTGALLSAFVQ

Intron Amino Acid Position:

2577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.2

76.5

38.7

Major BPS

72.5

0.56

1.2

63.4

Major PPT

87.4

0.84

0.6

Minor 5ss

33.3

-1.9

2.9

43.3

Minor BPS

44.8

-0.3

2.3

72.42

44.5

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605