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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6906403_6907051_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6906403 - 6907051

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTAACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CTTCTTTTAACA

Flanking Amino Acid:

KNNSPMAANQTPTLREKSIL

Intron Amino Acid Position:

2356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

89.7

0.98

0.7

89.9

Major PPT

77.7

0.62

0.9

73.4

34.8

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

71.8

0.68

1.2

75.92

35.5

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605