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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6912130_6913373_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6912130 - 6913373

Intron Length:

1244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGTGG

5'SS Class:

major

3'SS Sequence:

GATTAATTGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

GTTGTGTTAACT

Flanking Amino Acid:

VNFLIRIACQVNDNSNTAGS

Intron Amino Acid Position:

2077

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.41

1.1

54.1

45.4

Major BPS

0.6

1.2

75.9

36.3

Major PPT

59.7

0.22

1.1

51.8

46.6

Minor 5ss

34.8

-1.7

3.5

46.9

48.5

Minor BPS

58.6

0.35

2.2

79.89

42.3

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605