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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6917970_6918293_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6917970 - 6918293

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCATT

5'SS Class:

weak_major

3'SS Sequence:

TTGGTTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

TTGGTTTTGACA

Flanking Amino Acid:

RLDLQFQAIKIISIIVKNDE

Intron Amino Acid Position:

1614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

76.3

38.9

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

75.5

0.57

1.1

72.2

42.7

Minor 5ss

55.2

0.18

2.5

75.2

40.7

Minor BPS

61.4

0.35

1.4

68.82

38.3

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605