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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6918459_6918810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6918459 - 6918810

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCATTATTAAAA

Flanking Amino Acid:

NDPQWSRMFMSFLKHRDAKP

Intron Amino Acid Position:

1559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.5

0.73

0.9

83.8

31.2

Minor 5ss

34.5

-1.8

3.3

46.4

44.2

Minor BPS

56.8

0.21

1.7

66.42

39.5

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605