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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6925515_6926760_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6925515 - 6926760

Intron Length:

1246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TACTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTATTTTAAAC

Flanking Amino Acid:

QEAGEACMRKFLEGATIEVD

Intron Amino Acid Position:

1399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

82.7

0.74

0.8

31.2

Minor 5ss

-1.9

3.1

41.6

Minor BPS

61.8

0.35

1.4

68.78

36.2

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605