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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6926883_6927320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6926883 - 6927320

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTGATATTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTACTTTGATA

Flanking Amino Acid:

SLVPLRIAALNALAACNYLP

Intron Amino Acid Position:

1358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

0.85

0.9

39.9

Major PPT

79.9

0.67

0.9

73.9

40.6

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

71.9

0.68

1.2

78.71

31.1

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605