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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6928825_6929767_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6928825 - 6929767

Intron Length:

943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCATTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AATTTGGTAATT

Flanking Amino Acid:

VTVIMEPHKEVLQDMVPPKK

Intron Amino Acid Position:

1272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

84.4

0.85

34.5

Major PPT

0.45

65.7

40.6

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

46.5

-0.1

2.5

70.6

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605