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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6936707_6938446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6936707 - 6938446

Intron Length:

1740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GATTTATTAATC

Flanking Amino Acid:

FAAENEQMLKPHLHKIVNSS

Intron Amino Acid Position:

721

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.2

36.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

88.2

0.86

0.7

84.2

30.9

Minor 5ss

33.1

-1.9

3.8

49.2

47.3

Minor BPS

62.8

0.38

1.5

69.36

35.6

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605