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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6938639_6939191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6938639 - 6939191

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTGT

5'SS Class:

major

3'SS Sequence:

TTCCCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

GCAACATTAATT

Flanking Amino Acid:

ERISKNYALQIVANSFLANP

Intron Amino Acid Position:

657

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

73.3

38.2

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

0.85

0.7

25.6

Minor 5ss

48.1

-0.2

2.5

67.9

42.9

Minor BPS

0.27

1.7

67.88

42.6

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605