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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6939387_6940036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6939387 - 6940036

Intron Length:

650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TAAATTGCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATTTTCTAAATT

Flanking Amino Acid:

YAMQALDIYQVQIAGNGQTY

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

60.7

0.24

54.3

40.9

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

70.4

0.72

1.6

85.57

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605