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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6942160_6943480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6942160 - 6943480

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTTCATTT

Flanking Amino Acid:

GSGYTARETLRPLAYSTLAD

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

73.4

37.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.3

0.66

0.9

77.3

Minor 5ss

39.7

-1.2

3.1

48.1

Minor BPS

62.8

0.48

1.8

83.89

37.6

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605