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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6944945_6945307_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6944945 - 6945307

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGATGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ATTTTTTTGATA

Flanking Amino Acid:

FLAYIIRIYQELVAKYSQQM

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.7

39.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.8

0.65

0.9

36.7

Minor 5ss

38.6

-1.3

3.3

56.7

47.4

Minor BPS

69.8

0.62

75.26

29.2

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605