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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6946401_6946626_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6946401 - 6946626

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

LPIIVVLMYQLYKLNIHNVV

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

88.3

26.6

Major BPS

82.2

0.8

0.9

81.6

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

35.7

-1.6

2.6

43.1

43.8

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605