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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6947158_6947534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6947158 - 6947534

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

ATTATTATATTT

Flanking Amino Acid:

QIYKELPKVVNRYFENPQVI

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

81.9

26.2

Major BPS

84.7

0.86

74.3

40.7

Major PPT

79.2

0.66

0.9

73.9

36.8

Minor 5ss

38.5

-1.3

2.9

45.9

43.7

Minor BPS

46.9

-0.1

1.8

67.29

37.9

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605