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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6948412_6948973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6948412 - 6948973

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TACTCACTAAAA

Flanking Amino Acid:

ILSVMFRFLETENEENVLIC

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

85.4

30.8

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

100

1.12

0.4

100

Minor 5ss

47.8

-0.2

2.5

68.9

41.7

Minor BPS

48.8

-0

64.3

41.1

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605