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Intron Name: Anas_platyrhynchos_platyrhynchos_15_6949518_6953241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6949518 - 6953241

Intron Length:

3724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTTTTTGATT

Flanking Amino Acid:

MMQEVSENFENVTSSPQYST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

85.1

25.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

0.52

74.6

Minor 5ss

35.1

-1.7

2.7

42.4

44.3

Minor BPS

70.3

0.72

1.1

81.5

34.7

Associated Gene:

Gene:

TRRAP

Ensembl Gene ID:

ENSAPLG00000006552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020632

6863140 - 6953744

90605

ENSAPLT00000006923

6863140 - 6953744

90605