Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_697320_698478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

697320 - 698478

Intron Length:

1159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TGGGTTTCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACAAA

U12 Branch Point Sequence:

GTGTAACAAACA

Flanking Amino Acid:

RSAGGRPGWELSTNRGRPHS

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

49.3

-0

1.3

57.4

35.7

Major PPT

72.7

0.51

0.9

70.2

41.3

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

41.1

-0.6

2.2

55.32

42.8

Associated Gene:

Gene:

RBBP6

Ensembl Gene ID:

ENSAPLG00000009569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047328

690417 - 713583

23167

ENSAPLT00000022129

690417 - 713583

23167

ENSAPLT00000009988

690417 - 713583

23167