Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_703500_705903_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

703500 - 705903

Intron Length:

2404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATATA

5'SS Class:

strong_major

3'SS Sequence:

ACCTGTTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTCAAATAATT

Flanking Amino Acid:

ASISLAQLTKTANLAEANAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

63.2

0.3

58.2

40.7

Minor 5ss

44.8

-0.6

2.7

59.5

45.1

Minor BPS

46.9

-0.1

70.17

39.9

Associated Gene:

Gene:

RBBP6

Ensembl Gene ID:

ENSAPLG00000009569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009988

690417 - 713583

23167

ENSAPLT00000022129

690417 - 713583

23167