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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7056269_7058248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7056269 - 7058248

Intron Length:

1980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTAATCCTAATT

Flanking Amino Acid:

GGVLILGQEQDTVGGRFDAT

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

65.1

0.34

1.1

64.3

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

0.17

1.7

69.82

41.2

Associated Gene:

Gene:

NPTX2

Ensembl Gene ID:

ENSAPLG00000006430

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006665

7056041 - 7068563

12523