Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7184022_7184721_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7184022 - 7184721

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCTGGAT

5'SS Class:

weak_major

3'SS Sequence:

CTGTTTGCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

CTGTTCTCAGTC

Flanking Amino Acid:

RYKSRDIWAKIVSQDDPDQL

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.3

58.1

40.7

Major BPS

0.52

1.5

79.6

35.6

Major PPT

77.6

0.62

0.9

69.3

41.8

Minor 5ss

26.2

-2.7

3.5

38.7

46.4

Minor BPS

48.3

-0.1

1.8

57.63

Associated Gene:

Gene:

TECPR1

Ensembl Gene ID:

ENSAPLG00000005628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032833

7181294 - 7202629

21336

ENSAPLT00000005914

7181294 - 7202629

21336