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Intron Name: Anas_platyrhynchos_platyrhynchos_15_7184848_7186149_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7184848 - 7186149

Intron Length:
1302

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTACGTGCA

5'SS Class:
major

3'SS Sequence:
TTAATTTGTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTTTTAATT

Flanking Amino Acid:
SVWAVSLQGRVWYRENVCHH

Intron Amino Acid Position:
220

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.2
0.62
1.1
66.1
39.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
73.4
0.53
1
69.8
41.1

Minor 5ss
31.5
-2.1
3.2
32.6
42.2

Minor BPS
84.9
1.17
0.8
94.97
24.6

Associated Gene:

Gene:
TECPR1

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7181294 - 7202629
21336

7181294 - 7202629
21336