Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_7191840_7192368_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7191840 - 7192368

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAC

U12 Branch Point Sequence:

TTCACCTTAGTC

Flanking Amino Acid:

IYYMYHEEKKYIHVFLNEVT

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

69.4

36.7

Major BPS

66.1

0.4

1.1

69.1

37.9

Major PPT

77.1

0.61

0.8

76.4

32.2

Minor 5ss

35.1

-1.7

2.7

41.9

44.7

Minor BPS

63.2

0.39

1.6

40.7

Associated Gene:

Gene:

TECPR1

Ensembl Gene ID:

ENSAPLG00000005628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032833

7181294 - 7202629

21336

ENSAPLT00000005914

7181294 - 7202629

21336